PNPLA8

Protein-coding gene in the species Homo sapiens
PNPLA8
Identifiers
AliasesPNPLA8, IPLA2(GAMMA), IPLA2-2, IPLA2G, iPLA2gamma, MMLA, PNPLA-gamma, patatin like phospholipase domain containing 8
External IDsOMIM: 612123; MGI: 1914702; HomoloGene: 12136; GeneCards: PNPLA8; OMA:PNPLA8 - orthologs
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)[1]
Chromosome 7 (human)
Genomic location for PNPLA8
Genomic location for PNPLA8
Band7q31.1Start108,470,417 bp[1]
End108,569,666 bp[1]
Gene location (Mouse)
Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)[2]
Chromosome 12 (mouse)
Genomic location for PNPLA8
Genomic location for PNPLA8
Band12|12 B2Start44,268,153 bp[2]
End44,369,315 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • pancreatic epithelial cell

  • tibialis anterior muscle

  • deltoid muscle

  • entorhinal cortex

  • myocardium of left ventricle

  • Pars compacta

  • right ventricle

  • pars reticulata

  • corpus callosum
Top expressed in
  • muscle of thigh

  • brown adipose tissue

  • intercostal muscle

  • vastus lateralis muscle

  • temporal muscle

  • myocardium of ventricle

  • sternocleidomastoid muscle

  • triceps brachii muscle

  • mammary gland

  • soleus muscle
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • lysophospholipase activity
  • calcium-independent phospholipase A2 activity
  • hydrolase activity
  • ATP binding
  • phospholipase A2 activity
Cellular component
  • cytoplasm
  • integral component of membrane
  • Golgi apparatus
  • endoplasmic reticulum membrane
  • membrane
  • Golgi membrane
  • peroxisomal membrane
  • peroxisome
  • intracellular anatomical structure
  • endoplasmic reticulum
  • perinuclear region of cytoplasm
Biological process
  • linoleic acid metabolic process
  • phosphatidylethanolamine acyl-chain remodeling
  • phosphatidylcholine catabolic process
  • lipid metabolism
  • cell death
  • fatty acid metabolic process
  • lipid catabolic process
  • phosphatidylethanolamine catabolic process
  • prostaglandin biosynthetic process
  • metabolism
  • arachidonic acid metabolic process
  • phosphatidylcholine acyl-chain remodeling
  • arachidonic acid secretion
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

50640

67452

Ensembl

ENSG00000135241

ENSMUSG00000036257

UniProt

Q9NP80

Q8K1N1

RefSeq (mRNA)
NM_001256007
NM_001256008
NM_001256009
NM_001256010
NM_001256011

NM_015723

NM_026164

RefSeq (protein)
NP_001242936
NP_001242937
NP_001242938
NP_001242939
NP_001242940

NP_056538

NP_080440

Location (UCSC)Chr 7: 108.47 – 108.57 MbChr 12: 44.27 – 44.37 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Calcium-independent phospholipase A2-gamma is an enzyme that in humans is encoded by the PNPLA8 gene.[5][6][7][8][9]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000135241 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000036257 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Mancuso DJ, Jenkins CM, Gross RW (May 2000). "The genomic organization, complete mRNA sequence, cloning, and expression of a novel human intracellular membrane-associated calcium-independent phospholipase A(2)". J Biol Chem. 275 (14): 9937–45. doi:10.1074/jbc.275.14.9937. PMID 10744668.
  6. ^ Tanaka H, Takeya R, Sumimoto H (Jul 2000). "A novel intracellular membrane-bound calcium-independent phospholipase A(2)". Biochem Biophys Res Commun. 272 (2): 320–6. doi:10.1006/bbrc.2000.2776. PMID 10833412.
  7. ^ Wilson PA, Gardner SD, Lambie NM, Commans SA, Crowther DJ (Aug 2006). "Characterization of the human patatin-like phospholipase family". J Lipid Res. 47 (9): 1940–9. doi:10.1194/jlr.M600185-JLR200. PMID 16799181.
  8. ^ Kienesberger PC, Oberer M, Lass A, Zechner R (Apr 2009). "Mammalian patatin domain containing proteins: a family with diverse lipolytic activities involved in multiple biological functions". J Lipid Res. 50 Suppl (Supplement): S63–8. doi:10.1194/jlr.R800082-JLR200. PMC 2674697. PMID 19029121.
  9. ^ "Entrez Gene: PNPLA8 patatin-like phospholipase domain containing 8".

Further reading

  • Hartley JL, Temple GF, Brasch MA (2001). "DNA Cloning Using In Vitro Site-Specific Recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
  • Wiemann S, Weil B, Wellenreuther R (2001). "Toward a Catalog of Human Genes and Proteins: Sequencing and Analysis of 500 Novel Complete Protein Coding Human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
  • Simpson JC, Wellenreuther R, Poustka A (2001). "Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing". EMBO Rep. 1 (3): 287–92. doi:10.1093/embo-reports/kvd058. PMC 1083732. PMID 11256614.
  • Strausberg RL, Feingold EA, Grouse LH (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Scherer SW, Cheung J, MacDonald JR (2003). "Human Chromosome 7: DNA Sequence and Biology". Science. 300 (5620): 767–72. Bibcode:2003Sci...300..767S. doi:10.1126/science.1083423. PMC 2882961. PMID 12690205.
  • Ota T, Suzuki Y, Nishikawa T (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Wiemann S, Arlt D, Huber W (2004). "From ORFeome to Biology: A Functional Genomics Pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
  • Murakami M, Masuda S, Ueda-Semmyo K (2005). "Group VIB Ca2+-independent phospholipase A2gamma promotes cellular membrane hydrolysis and prostaglandin production in a manner distinct from other intracellular phospholipases A2". J. Biol. Chem. 280 (14): 14028–41. doi:10.1074/jbc.M413766200. PMID 15695510.
  • Mehrle A, Rosenfelder H, Schupp I (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.


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